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publications

Methanol fixation is the method of choice for droplet-based single-cell transcriptomics of neural cells

Published in Communications Biology, 2023

Comprehensive evaluation of fixation methods for single-cell transcriptomics reveals methanol as the optimal choice for neural cells.

Recommended citation: Gutiérrez-Franco, A., Ake, F., Hassan, M.N., Cayuela, N.C., Mularoni, L., Plass, M. (2023). Methanol fixation is the method of choice for droplet-based single-cell transcriptomics of neural cells. Communications Biology, 6(1), 522.
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Quantification of transcript isoforms at the single-cell level using SCALPEL

Published in Nature Communications, 2025

SCALPEL enables accurate quantification of transcript isoforms at single-cell resolution, advancing our understanding of isoform regulation.

Recommended citation: Ake, F., Schilling, M., Fernández-Moya, S.M., Jaya Ganesh, A., et al. (2025). Quantification of transcript isoforms at the single-cell level using SCALPEL. Nature Communications, 16(1), 6402.
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talks

teaching

Teaching experience 1

Undergraduate course, University 1, Department, 2014

This is a description of a teaching experience. You can use markdown like any other post.

Teaching experience 2

Workshop, University 1, Department, 2015

This is a description of a teaching experience. You can use markdown like any other post.